All functions |
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Calculate the adjacency matrix given a spatial coordinate matrix |
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Calculate UMAP projections for coembedding of cells and features |
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Coembedding dimensional reduction plot |
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Cell-feature coembedding for SRT data |
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Determine the dimension of low dimensional embedding |
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Find the signature genes for each group of cell/spots |
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Obtain the top signature genes and related information |
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Cell-feature coembedding for scRNA-seq data |
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Calculate the cell-feature distance matrix |