A Seurat object including scRNA-seq PBMC dataset

This data is a subset of PBMC3k scRNA-seq data in SeuratData package.

data(pbmc3k_subset)

Format

A Seurat object, including count matrix, and manual annotation.

Source

The data is from the scRNA-seq sequencing platform.

References

None

Examples

  # Show  examples of how to use the dataset.  
  data(pbmc3k_subset)  
  library(Seurat)
  pbmc3k_subset
#> An object of class Seurat 
#> 400 features across 2700 samples within 1 assay 
#> Active assay: RNA (400 features, 400 variable features)
#>  2 dimensional reductions calculated: ncfm, UMAPsig